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Webinar: RNA-Seq Basics with Oxford Nanopore Technologies and CyVerse Tools

Sequencing RNA is a basic first step in interpreting the functional elements of an organism's genome. With the advent of portable commercial sequencing devices based on Oxford Nanopore Technology, RNA sequencing analyses can be done in the field or in the lab, and easily applied to plants, animals, microbes, and humans. In this introductory level webinar, University of Arizona research associate/plant biologist Andrew Nelson will demonstrate how to generate raw RNA sequence data using Oxford Nanopore Technology, as well as discuss how to use CyVerse apps and tools to preliminarily process the raw sequences to allow you to use other apps in CyVerse (such as NanoDJ) to do genome assembly or metagenomics analyses (both of which will be taught in upcoming CyVerse webinars). Additional webinar materials can be found here: https://wiki.cyverse.org/wiki/display... CyVerse provides powerful infrastructure for computational research involving large datasets and complex analyses. Using CyVerse, teams can overcome scaling and complexity challenges to tackle questions that previously were unapproachable. *Get Started!* Create your Account: http://cyver.se/account Learn about CyVerse: https://cyverse.org Learn how to use CyVerse: http://cyver.se/learn *Make CyVerse work for you!* Use hundreds of bioinformatics apps and manage data in a simple web interface Launch the Discovery Environment: http://cyver.se/de *Create a custom cloud-based scientific analysis platform or use a ready-made one for your area of scientific interest.* Launch Atmosphere: http://cyver.se/atmo *Securely store data for active analyses or sharing with your collaborators.* Launch the Data Store: http://cyver.se/datastore *Access discoverable and reusable datasets with metadata features and functions.* Launch the Data Commons: http://cyver.se/datacommons *Exchange, explore, and analyze biological images and their metadata.* Launch BisQue: http://cyver.se/bisque *Follow us!* Twitter: http://cyver.se/twitter Facebook: http://cyver.se/Facebook LinkedIn: http://cyver.se/LinkedIn YouTube: http://cyver.se/YouTube GitHub: http://cyver.se/GitHub Still have questions? Email [email protected] This material is based upon work supported by the National Science Foundation under Grant Nos. DBI-0735191, DBI-1265383, and DBI-1743442.