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How to create a violin plot with ggplot2 in R with geom_violin and geom_dotplot (CC092) 3 года назад


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How to create a violin plot with ggplot2 in R with geom_violin and geom_dotplot (CC092)

One of the trendy data visualization methods is a violin plot. In this Code Club, Pat will show you how to create a violin plot in ggplot2 with geom_violin and how to show individual data points on the plot with ggplot2's geom_jitter and geom_dotplot functions. We'll also see how to indicate specific quantiles on the plot. Pat will use RStudio and functions from the #ggplot2 package including #geom_violin, #geom_jitter, and #geom_dotplot and functions from other packages from the tidyverse. The accompanying blog post can be found at https://www.riffomonas.org/code_club/.... Do you have a figure that you would like to receive a critique or help improving? Let me know and I'd be happy to arrange a guest appearance! If you're interested in taking an upcoming 3 day R workshop, email me at [email protected]! R: https://r-project.org RStudio: https://rstudio.com Raw data: https://github.com/riffomonas/raw_dat... Workshops: https://www.mothur.org/wiki/workshops You can also find complete tutorials for learning R with the tidyverse using... Microbial ecology data: https://www.riffomonas.org/minimalR/ General data: https://www.riffomonas.org/generalR/ 0:00 Introduction 2:01 Creating a violin plot 5:16 Adding individual data to violins w/ geom_jitter 6:02 Adding individual data to violins w/ geom_dotplot 9:23 Adding quantiles to violin plot 11:01 Adding median with stat_summary 11:53 Removing violin body 12:59 Critique of violin and box plots 17:09 Conclusion

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